| Filename |
Size |
| medaka_consensus.20241212
| 1.2T |
| dipcall_output
| 10.6G |
| assembly.v1.0.PAN027.medaka_polished.diploid.fa | 5.6G |
| assembly.v1.0.PAN027.medaka_polished.paternal.fa | 2.8G |
| assembly.v1.0.PAN027.medaka_polished.maternal.fa | 2.8G |
| dipcall.PAN027.paternal.pair.vcf | 330.6M |
| dipcall.PAN027.maternal.pair.vcf | 325.8M |
| paternal_polished_on_v1.0.vcf | 38.4M |
| paternal_APKpolished_on_paternal_v1.0.vcf | 35.3M |
| maternal_APKpolished_on_maternal_v1.0.vcf | 33.2M |
| maternal_polished_on_v1.0.vcf | 28.2M |
| dipcall.kit
| 21.8M |
| dipcall-0.3_x64-linux.tar.bz2 | 7.7M |
| paternal_polished_on_v1.0.paf | 4.8M |
| maternal_polished_on_v1.0.paf | 4.6M |
| run_medaka.20241212.6410671.log | 2.3M |
| run_paftools.20250218.6602433.log | 11.1K |
| run_dipcall.20250209.6522949.log | 9.8K |
| contig-0008008_generation2_aligned.paf | 8.2K |
| assembly.v1.0.PAN027.medaka_polished.diploid.fa.fai | 2.7K |
| prefix.PAN027.maternal.mak | 2.2K |
| prefix.PAN027.paternal.mak | 2.2K |
| maternal_header.vcf | 1.5K |
| paternal_header.vcf | 1.5K |
| split_vcf_into_genotypes.py | 1.5K |
| README.txt | 1.5K |
| assembly.v1.0.PAN027.maternal.fa.fai | 1.4K |
| assembly.v1.0.PAN027.paternal.fa.fai | 1.4K |
| assembly.v1.0.PAN027.medaka_polished.maternal.fa.fai | 1.4K |
| assembly.v1.0.PAN027.medaka_polished.paternal.fa.fai | 1.4K |
| run_paftools_PAN027.sh | 1.1K |
| run_dipcall_PAN027.sh | 1.1K |
| run_medaka_PAN027.sh | 1016 |
| split_vcf_file_by_parent.sh | 817 |
| polished.maternal.ids.txt | 496 |
| polished.paternal.ids.txt | 496 |
| PAN027.filtered.ONT.bam | 117 |
| 09_27_24_R1041_APK_Pedigree_HG06807_1_dorado0.8.1_sup5.0.0_A100.bam | 113 |
| assembly.v1.0.PAN027.maternal.fa | 43 |
| assembly.v1.0.PAN027.paternal.fa | 43 |