| Filename |
Size |
| merged_reference.bed | 342.3M |
| merged_reference_subset.bed | 340.5M |
| intersect_aou_variants
| 240.5M |
| merged_reference.bcf | 239.4M |
| merged_reference_pca_no_qc.eigenvec.allele | 225.3M |
| reference_pca_subset.eigenvec.allele | 225.3M |
| merged_reference_subset.pgen | 150.7M |
| merged_reference_subset_filtered.pgen | 143.6M |
| merged_reference_pca.eigenvec.allele | 67.9M |
| merged_reference_subset_pruned.pgen | 54.5M |
| merged_reference.bim | 32.5M |
| merged_reference_subset.bim | 32.3M |
| pca_variants_info.txt | 32.3M |
| merged_reference_subset.pvar | 30.6M |
| variants_arrays_plink2_no_sex_chr.txt | 30.1M |
| merged_reference_subset_filtered.pvar | 21.1M |
| variants_used_in_pca.txt | 16.7M |
| temp_snps.snplist | 16.6M |
| merged_reference_subset_pruned.pvar | 9.2M |
| plink2_linux_x86_64_20241114.zip | 8.9M |
| merged_reference_subset_prune.prune.out | 6.5M |
| merged_reference_subset_prune.prune.in | 5.0M |
| merged_reference.bcf.csi | 1.3M |
| reference_pca_subset.eigenvec | 184.4K |
| reference_panel_pca.eigenvec | 184.3K |
| merged_reference_pca.eigenvec | 181.5K |
| merged_reference_pca_no_qc.eigenvec | 181.4K |
| merged_reference.fam | 30.2K |
| merged_reference_subset.fam | 30.2K |
| merged_reference_subset.psam | 18.3K |
| merged_reference_subset_filtered.psam | 18.3K |
| merged_reference_subset_pruned.psam | 18.3K |
| merged_reference_subset_filtered.log | 1.0K |
| merged_reference_pca_no_qc.log | 1020 |
| merged_reference_pca.log | 995 |
| merged_reference_subset_pruned.log | 993 |
| reference_pca_subset.log | 972 |
| merged_reference.log | 950 |
| merged_reference_subset_prune.log | 929 |
| reference_panel_pca.log | 884 |