| Filename |
Size |
| repeats
| 31.5G |
| RM_1523946.FriJan50000162024
| 3.3G |
| GCF_000002285.3_CanFam3.1_genomic.fna | 2.3G |
| RM_2880558.SunDec172349242023
| 1.5G |
| Canis_lupus_familiaris.nsq | 575.0M |
| transcripts.fa | 136.2M |
| transcripts.no_tes.fa | 129.4M |
| Canis_lupus_familiaris-families.stk | 43.6M |
| proteins.fa | 42.5M |
| uniprot_all_species.tsv | 29.1M |
| transcripts.no_tes.fa.nsq | 26.7M |
| transcripts.no_tes.fa.nhr | 26.3M |
| gene_centric_flank_analysis
| 20.3M |
| localUniprot.tsv | 6.9M |
| gene_centric_analysis
| 6.6M |
| gene2GO.tsv | 5.3M |
| gene2GO_final.tsv | 5.3M |
| localUniprotID.tsv | 2.8M |
| localUniprotID1.1.tsv | 1.4M |
| localUniprotID1.2.tsv | 1.4M |
| windows.bed | 1.3M |
| gene2GOID.tsv | 1.2M |
| proteins.fa.vs.RepeatPeps.25cul2.1e5.blastp.out | 1.1M |
| DNA_repeat_coverage.bed | 1.0M |
| LINE_repeat_coverage.bed | 1.0M |
| SINE_repeat_coverage.bed | 1.0M |
| Simple_repeat_coverage.bed | 1.0M |
| TE_repeat_coverage.bed | 1.0M |
| LTR_repeat_coverage.bed | 1.0M |
| windows_filtered.bed | 804.8K |
| geneFileID.tsv | 801.9K |
| passing_genes.list | 801.7K |
| geneFile_final_TEs.tsv | 795.0K |
| geneFile.tsv | 795.0K |
| geneFile_final.tsv | 768.6K |
| transcripts.no_tes.fa.nin | 663.0K |
| transcripts.no_tes.fa.not | 662.9K |
| Canis_lupus_familiaris-families.fa | 536.6K |
| consensi.fa.classified.filtered_for_CDS_repeats.fa | 513.9K |
| passing_genes.list.sorted.uniq | 284.5K |