| Filename |
Size |
| repeats
| 38.6G |
| RM_2283867.SunMar101742202024
| 2.3G |
| GCF_010645085.1_ASM1064508v1_genomic.fna | 1.7G |
| GCF_902713435.1_fAciRut3.1_paternal_haplotype_genomic.fna | 1.6G |
| Acipenser_ruthenus.nsq | 396.7M |
| transcripts.fa | 155.3M |
| transcripts.no_tes.fa | 148.1M |
| Acipenser_ruthenus-families.stk | 110.0M |
| proteins.fa | 48.3M |
| transcripts.no_tes.fa.nsq | 30.5M |
| transcripts.no_tes.fa.nhr | 30.1M |
| uniprot_all_species.tsv | 3.4M |
| Acipenser_ruthenus-families.fa | 2.4M |
| consensi.fa.classified.filtered_for_CDS_repeats.fa | 2.2M |
| geneFile.tsv | 1.6M |
| geneFile_final_TEs.tsv | 1.6M |
| geneFileID.tsv | 1.5M |
| proteins.fa.vs.RepeatPeps.25cul2.1e5.blastp.out | 1.3M |
| transcripts.no_tes.fa.nin | 753.9K |
| transcripts.no_tes.fa.not | 753.7K |
| all_genes.list | 434.4K |
| repeatmodeller_lib.vs.transcripts.no_tes.25cul2.1e10.megablast.out | 395.8K |
| all_genesID.list | 351.9K |
| localUniprot.tsv | 291.5K |
| transcripts.no_tes.fa.nto | 251.2K |
| transcripts.no_tes.fa.ndb | 20.0K |
| scaffolds.bed | 20.0K |
| transcripts.no_tes.fa.ntf | 16.0K |
| Acipenser_ruthenus.nhr | 8.0K |
| Acipenser_ruthenus-rmod.log | 6.6K |
| Acipenser_ruthenus.translation | 4.1K |
| gene2GO.tsv | 3.0K |
| gene2GO_final.tsv | 3.0K |
| TE-compartmentalization_pipeline.sh | 2.8K |
| Acipenser_ruthenus.nin | 2.7K |
| Acipenser_ruthenus.nnd | 1.8K |
| Acipenser_ruthenus.nog | 932 |
| Acipenser_ruthenus.njs | 523 |
| all_genes.list.filtered | 215 |
| all_genes.list_final_TEs.filtered | 215 |