| Filename |
Size |
| align.bam | 9.1M |
| collapsed.annotated_transcripts.fa | 8.2M |
| fixed_quantify.sample2.badread40X.c1.flair.aligned.bam | 7.3M |
| quantify.sample2.badread40X.c1.flair.aligned.bam | 7.3M |
| intermediate_results_dir
| 5.1M |
| logs
| 2.6M |
| collapsed.unassigned.fasta | 2.3M |
| fixed_clair3
| 1.7M |
| clair3_output
| 1.7M |
| align.bed | 1.1M |
| corrected_all_corrected.bed | 1.0M |
| collapsed.annotated_transcripts.bed | 721.1K |
| collapsed.isoforms.fa | 390.1K |
| filtered_isoforms.fa | 389.0K |
| collapsed.firstpass.fa | 347.5K |
| align_trash.bam | 259.5K |
| collapsed.combined.isoform.read.map.txt | 224.4K |
| fixed_quantify.sample2.badread40X.c1.isoform.read.map.txt | 222.2K |
| quantify.sample2.badread40X.c1.isoform.read.map.txt | 222.2K |
| collapsed.annotated_transcripts.isoform.read.map.txt | 215.0K |
| collapsed.unassigned.bed | 187.8K |
| collapsed.isoforms.gtf | 182.4K |
| sample2.badread40X.deepvariant.g.vcf.gz | 133.3K |
| fixed_sample2.badread40X.deepvariant.g.vcf.gz | 123.3K |
| sample2.badread40X.genome.deepvariant.g.vcf.gz | 119.0K |
| collapsed.firstpass.unfiltered.bed | 72.0K |
| clair3_genome
| 61.2K |
| corrected_all_inconsistent.bed | 51.1K |
| collapsed.isoforms.bed | 30.5K |
| filtered_transcripts.bed | 30.2K |
| collapsed.annotated_transcripts.supported.bed | 27.8K |
| collapsed.firstpass.bed | 27.5K |
| align.bam.bai | 27.4K |
| align_trash.bam.bai | 25.0K |
| fixed_quantify.sample2.badread40X.c1.flair.aligned.bam.bai | 15.1K |
| quantify.sample2.badread40X.c1.flair.aligned.bam.bai | 15.1K |
| filtered_isoforms.fa.fai | 10.9K |
| collapsed.isoform.read.map.txt | 9.6K |
| fixed_quantify.counts.tsv | 7.9K |
| quantify.counts.tsv | 7.9K |