| Filename |
Size |
| collapsed.annotated_transcripts.fa | 8.2M |
| align.bam | 2.6M |
| logs
| 2.3M |
| fixed_quantify.sample2.badread10X.c1.flair.aligned.bam | 2.1M |
| quantify.sample2.badread10X.c1.flair.aligned.bam | 2.1M |
| fixed_clair3
| 1.8M |
| clair3_output
| 1.8M |
| intermediate_results_dir
| 1.2M |
| collapsed.annotated_transcripts.bed | 721.1K |
| collapsed.unassigned.fasta | 617.4K |
| collapsed.isoforms.fa | 387.1K |
| filtered_isoforms.fa | 386.0K |
| align.bed | 290.8K |
| corrected_all_corrected.bed | 277.0K |
| sample2.badread10X.genome.deepvariant.g.vcf.gz | 238.7K |
| collapsed.firstpass.fa | 231.1K |
| collapsed.isoforms.gtf | 181.8K |
| sample2.badread10X.deepvariant.g.vcf.gz | 170.0K |
| clair3_genome
| 90.6K |
| collapsed.combined.isoform.read.map.txt | 65.7K |
| fixed_quantify.sample2.badread10X.c1.isoform.read.map.txt | 64.7K |
| quantify.sample2.badread10X.c1.isoform.read.map.txt | 64.7K |
| collapsed.annotated_transcripts.isoform.read.map.txt | 62.8K |
| collapsed.unassigned.bed | 47.0K |
| collapsed.isoforms.bed | 30.4K |
| filtered_transcripts.bed | 30.1K |
| align_trash.bam | 28.4K |
| collapsed.annotated_transcripts.supported.bed | 27.8K |
| collapsed.firstpass.unfiltered.bed | 26.6K |
| align.bam.bai | 26.1K |
| align_trash.bam.bai | 24.4K |
| collapsed.firstpass.bed | 18.0K |
| fixed_quantify.sample2.badread10X.c1.flair.aligned.bam.bai | 15.0K |
| quantify.sample2.badread10X.c1.flair.aligned.bam.bai | 15.0K |
| corrected_all_inconsistent.bed | 13.9K |
| filtered_isoforms.fa.fai | 10.8K |
| fixed_quantify.counts.tsv | 7.7K |
| quantify.counts.tsv | 7.7K |
| collapsed.annotated_transcripts.alignment.counts | 7.1K |
| .DS_Store | 6.0K |