| Filename |
Size |
| U2AF1_juncbase_trimmed_bams_entropy_offset.txt | 457.7M |
| U2AF1_juncbase_trimmed_bams_entropy_scores.txt | 8.9M |
| opus7
| 515.9K |
| getASEventReadCounts.py | 298.2K |
| MANUAL.pdf | 256.2K |
| getASEventReadCounts.pyc | 116.9K |
| pairwise_fishers_test_getASEvents_w_reference.py | 42.9K |
| getAllPossibleSpliceJunctions.py | 38.4K |
| compareSampleSets.py | 36.0K |
| preProcess_getASEventReadCounts_by_chr.py | 32.3K |
| preProcess_getASEventReadCounts.py | 29.1K |
| build_DB_FromGTF.py | 26.6K |
| build_DB_FromGTF_mysql.py | 24.7K |
| createAS_CountTables.py | 22.3K |
| compareSampleSets.pyc | 21.5K |
| run_getASEventReadCounts_multiSample.py | 20.4K |
| preProcess_getASEventReadCounts_by_chr.pyc | 18.8K |
| getIntronRetentionEvents.py | 18.6K |
| preProcess_getASEventReadCounts.pyc | 16.7K |
| README | 15.2K |
| README_getASEventReadCounts_intermediate_outputs.txt | 14.3K |
| preProcess_getASEventReadCounts_step3.py | 14.2K |
| coordReadCounts.py | 14.1K |
| disambiguate_junctions.py | 13.3K |
| intron_exon_jctn_counts.py | 12.9K |
| plotEntropyScores.py | 12.1K |
| buildVirtualReference_median.py | 11.1K |
| makeNonRedundantAS.py | 10.9K |
| combine_createAS_CountTables_by_chr.py | 10.8K |
| preProcess_getASEventReadCounts_by_chr_step2.py | 9.3K |
| createPseudoSample.py | 8.8K |
| run_createAS_CountTables.py | 8.2K |
| convert_junction_sam.py | 7.7K |
| helperFunctions.pyc | 7.7K |
| run_preProcess_step3_by_chr.py | 7.5K |
| pysqlite_wrap.py | 7.2K |
| coord_helperFunctions.py | 7.2K |
| run_preProcess_by_chr_step1.py | 7.2K |
| pysqlite_wrap.pyc | 6.9K |
| runCufflinks.py | 6.8K |