| Filename |
Size |
| igv_validation
| 90.3G |
| rerunning_basecaller
| 49.3G |
| 12_13_23_R1041_StudentProject_HG002.pod5.tar | 37.3G |
| 12_13_23_R1041_StudentProject_HG002
| 37.3G |
| output_samtools_view.txt | 10.0G |
| project_data_output_modifications_5mCG_5hmCG.fastq | 5.5G |
| project_data_output_duplex_modifications_5mC_5hmC.bam | 3.9G |
| project_data_output_modifications_5mC_5hmC.bam | 3.2G |
| project_data_output_duplex_modifications_5mCG_5hmCG.bam | 2.7G |
| project_data_output_modifications_5mCG_5hmCG.bam | 2.5G |
| reads.q20.fastq | 2.4G |
| project_data_basecaller_5hmC_modification_summary.tsv | 570.5M |
| .temp_dorado_model-89fcc36978fa8785
| 177.4M |
| .temp_dorado_model-f45312dadfa16a9e
| 20.0M |
| NanoPlot-report.html | 1.5M |
| LengthvsQualityScatterPlot_kde.html | 677.5K |
| LengthvsQualityScatterPlot_dot.html | 455.5K |
| Yield_By_Length.html | 165.8K |
| WeightedLogTransformed_HistogramReadlength.html | 70.5K |
| Non_weightedLogTransformed_HistogramReadlength.html | 55.2K |
| LengthvsQualityScatterPlot_kde.png | 47.1K |
| WeightedHistogramReadlength.html | 42.7K |
| Non_weightedHistogramReadlength.html | 42.1K |
| LengthvsQualityScatterPlot_dot.png | 39.6K |
| Yield_By_Length.png | 31.9K |
| Non_weightedLogTransformed_HistogramReadlength.png | 30.9K |
| WeightedLogTransformed_HistogramReadlength.png | 29.9K |
| WeightedHistogramReadlength.png | 26.3K |
| Non_weightedHistogramReadlength.png | 24.0K |
| NanoPlot_20231218_1355.log | 3.7K |
| NanoPlot_20231218_1404.log | 2.7K |
| run_project_basecaller_5hmC_mod.1482249.log | 2.1K |
| run_project_basecaller_5hmC_mod.1482248.log | 2.0K |
| dorado_summary_on_5hmC_call.sh | 1.5K |
| basecalling_project_data.sh | 1.3K |
| aligning_and_indexing_data.sh | 1.3K |
| NanoStats.txt | 1.2K |
| NanoStats_post_filtering.txt | 1.2K |
| NanoPlot_20231218_1357.log | 1.1K |
| run_project_basecaller.1482233.log | 1.1K |