| Filename |
Size |
| .git
| 3.3M |
| __pycache__
| 265.4K |
| trnamature-euk.cm | 66.3K |
| TRNAinf-euk.cm | 63.9K |
| TRNAMatureMitoinf.cm | 63.3K |
| trnamature-arch.cm | 63.1K |
| TRNAinf-arch.cm | 63.1K |
| trnamature-bact.cm | 63.0K |
| TRNAinf-bact.cm | 63.0K |
| TRNAinf.cm | 61.2K |
| countreadtypes.py | 59.9K |
| getcoverage.py | 50.7K |
| trnasequtils.py | 50.2K |
| countreads.py | 46.8K |
| modelmismatch.py | 45.3K |
| newcoverageplots.R | 43.6K |
| LICENSE | 34.3K |
| traxqc.py | 33.0K |
| getends.py | 31.5K |
| processsamples.py | 29.4K |
| getgenomicmismatches.py | 28.4K |
| boxplotmismatches.R | 25.5K |
| threadprocesssamples.py | 24.9K |
| comparetrnasets.py | 19.9K |
| mapreads.py | 19.6K |
| endplots.R | 19.2K |
| makescatter.R | 16.0K |
| trimadapters.py | 16.0K |
| coverageplots.R | 14.7K |
| maketrackhub.py | 13.7K |
| parsetrnas.py | 13.1K |
| choosemappings.py | 11.8K |
| analyzecounts.R | 11.6K |
| maketrnadb.py | 11.3K |
| condensebam.py | 10.4K |
| getmaturetrnas.py | 7.9K |
| convertbam.py | 7.2K |
| locuscoverage.R | 7.0K |
| ccaendplot.R | 5.6K |
| quickdb.bash | 5.0K |