| Filename |
Size |
| SalmonUtils.cpp | 125.0K |
| SalmonQuantify.cpp | 101.2K |
| ksw2pp
| 98.4K |
| edlib.cpp | 82.2K |
| SalmonAlevin.cpp | 71.0K |
| SalmonQuantifyAlignments.cpp | 56.5K |
| CollapsedGibbsSampler.cpp | 35.6K |
| CollapsedEMOptimizer.cpp | 35.4K |
| metro
| 34.2K |
| ProgramOptionsGenerator.cpp | 33.7K |
| GZipWriter.cpp | 33.6K |
| Alevin.cpp | 32.3K |
| xxhash.c | 30.1K |
| CollapsedCellOptimizer.cpp | 27.7K |
| WhiteList.cpp | 22.4K |
| AlevinUtils.cpp | 20.7K |
| AlignmentModel.cpp | 20.1K |
| SGSmooth.cpp | 16.0K |
| FastxParser.cpp | 15.0K |
| CMakeLists.txt | 11.7K |
| SBModel.cpp | 10.6K |
| PCA.cpp | 10.4K |
| SequenceBiasModel.cpp | 9.4K |
| Salmon.cpp | 9.2K |
| SalmonQuantMerge.cpp | 9.0K |
| BuildSalmonIndex.cpp | 7.9K |
| posix.cc | 7.6K |
| FragmentList.cpp | 7.6K |
| FragmentLengthDistribution.cpp | 6.9K |
| VersionChecker.cpp | 6.5K |
| Dedup.cpp | 6.4K |
| FragmentStartPositionDistribution.cpp | 6.1K |
| BWAUtils.cpp | 6.1K |
| PCAUtils.cpp | 4.5K |
| FASTAParser.cpp | 4.4K |
| GenomicFeature.cpp | 3.3K |
| SimplePosBias.cpp | 3.3K |
| EMUtils.cpp | 3.2K |
| LibraryFormat.cpp | 2.6K |
| DistributionUtils.cpp | 2.5K |