| Filename |
Size |
| input_files
| 85.7M |
| test_identification_flow.py | 15.4K |
| test_assignment_chr11_and_Tcf3_examples.py | 9.5K |
| test_database_updates.py | 9.1K |
| test_monoexonic.py | 8.0K |
| test_queries.py | 7.8K |
| test_FSM_identification.py | 6.5K |
| test_permissive_match.py | 5.9K |
| test_search_for_overlap_with_gene.py | 5.8K |
| test_process_remaining_mult_cases.py | 5.8K |
| test_ISM_identification.py | 4.4K |
| test_NIC_identification.py | 4.0K |
| build_test_databases.py | 3.7K |
| test_get_introns.py | 2.6K |
| test_match_all_splice_vertices.py | 2.2K |
| test_compute_transcript_end.py | 2.0K |
| test_find_gene_match_on_vertex_basis.py | 1.9K |
| test_NNC_identification.py | 1.8K |
| test_match_all_transcript_edges.py | 1.7K |
| test_search_for_ISM_match.py | 1.7K |
| test_match_all_splice_edges.py | 1.7K |
| test_search_for_transcript.py | 1.5K |
| test_search_for_vertex.py | 1.5K |
| test_search_for_edge.py | 1.3K |
| test_all_exons_known.py | 1.2K |
| test_post_talon_utils.py | 1.1K |
| test_all_SJs_known.py | 1.1K |
| test_splitMD.py | 1.0K |
| test_get_overlap.py | 959 |
| helper_fns.py | 958 |
| test_compute_alignment_identity.py | 890 |
| test_create_temp_gene_table.py | 829 |
| test_compute_delta.py | 825 |
| test_compute_exon_lengths.py | 724 |
| test_compute_jI.py | 685 |
| test_compute_transcript_model_length_from_exons.py | 673 |
| test_compute_alignment_coverage.py | 551 |
| README.md | 478 |
| Makefile | 267 |
| pytest.ini | 182 |