| Filename |
Size |
| example
| 25.2M |
| bowtie2-align-l | 11.1M |
| bowtie2-align-s | 10.9M |
| bowtie2-build-l | 3.6M |
| bowtie2-inspect-l | 2.4M |
| bowtie2-inspect-s | 2.4M |
| bt2_search.cpp | 180.2K |
| doc
| 131.8K |
| MANUAL.markdown | 103.0K |
| aligner_sw.cpp | 101.9K |
| aligner_seed2.cpp | 101.6K |
| bt2_idx.h | 94.3K |
| MANUAL | 89.0K |
| ds.h | 86.3K |
| aligner_sw_driver.cpp | 82.4K |
| aligner_swsse_loc_i16.cpp | 74.5K |
| sstring.h | 74.3K |
| aligner_swsse_loc_u8.cpp | 73.2K |
| aligner_seed2.h | 69.3K |
| aln_sink.cpp | 68.0K |
| aligner_swsse_ee_i16.cpp | 61.8K |
| aligner_swsse_ee_u8.cpp | 61.0K |
| aligner_seed.cpp | 54.2K |
| aligner_bt.cpp | 52.7K |
| aligner_result.cpp | 50.9K |
| aligner_result.h | 49.6K |
| scripts
| 46.2K |
| aligner_seed.h | 44.6K |
| aln_sink.h | 44.4K |
| blockwise_sa.h | 41.1K |
| multikey_qsort.h | 37.8K |
| dp_framer.cpp | 36.3K |
| group_walk.h | 36.0K |
| LICENSE | 34.3K |
| pat.cpp | 34.2K |
| diff_sample.h | 30.9K |
| pe.cpp | 30.8K |
| aligner_bt.h | 30.2K |
| bt2_io.cpp | 30.1K |
| aligner_seed_policy.cpp | 27.0K |